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CHIEFSOFT\ameye
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<?php
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/**
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* @file plugins/reports/articles/ArticleReportPlugin.php
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*
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* Copyright (c) 2014-2021 Simon Fraser University
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* Copyright (c) 2003-2021 John Willinsky
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* Distributed under the GNU GPL v3. For full terms see the file docs/COPYING.
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*
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* @class ArticleReportPlugin
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*
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* @ingroup plugins_reports_article
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*
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* @brief Article report plugin
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*/
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namespace APP\plugins\reports\articles;
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use APP\decision\Decision;
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use APP\facades\Repo;
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use PKP\core\PKPString;
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use PKP\db\DAORegistry;
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use PKP\facades\Locale;
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use PKP\plugins\ReportPlugin;
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use PKP\security\Role;
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use PKP\stageAssignment\StageAssignmentDAO;
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use PKP\submission\PKPSubmission;
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use PKP\submission\SubmissionAgencyDAO;
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use PKP\submission\SubmissionDisciplineDAO;
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use PKP\submission\SubmissionKeywordDAO;
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use PKP\submission\SubmissionSubjectDAO;
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class ArticleReportPlugin extends ReportPlugin
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{
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/**
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* @copydoc Plugin::register()
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*
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* @param null|mixed $mainContextId
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*/
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public function register($category, $path, $mainContextId = null)
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{
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$success = parent::register($category, $path, $mainContextId);
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$this->addLocaleData();
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return $success;
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}
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/**
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* Get the name of this plugin. The name must be unique within
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* its category.
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*
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* @return string name of plugin
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*/
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public function getName()
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{
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return 'ArticleReportPlugin';
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}
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/**
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* @copydoc Plugin::getDisplayName()
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*/
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public function getDisplayName()
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{
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return __('plugins.reports.articles.displayName');
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}
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/**
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* @copydoc Plugin::getDescriptionName()
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*/
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public function getDescription()
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{
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return __('plugins.reports.articles.description');
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}
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/**
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* @copydoc ReportPlugin::display()
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*/
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public function display($args, $request)
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{
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$context = $request->getContext();
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$acronym = PKPString::regexp_replace('/[^A-Za-z0-9 ]/', '', $context->getLocalizedAcronym());
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// Prepare for UTF8-encoded CSV output.
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header('content-type: text/comma-separated-values');
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header('content-disposition: attachment; filename=articles-' . $acronym . '-' . date('Ymd') . '.csv');
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$fp = fopen('php://output', 'wt');
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// Add BOM (byte order mark) to fix UTF-8 in Excel
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fprintf($fp, chr(0xEF) . chr(0xBB) . chr(0xBF));
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$stageAssignmentDao = DAORegistry::getDAO('StageAssignmentDAO'); /** @var StageAssignmentDAO $stageAssignmentDao */
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$submissionKeywordDao = DAORegistry::getDAO('SubmissionKeywordDAO'); /** @var SubmissionKeywordDAO $submissionKeywordDao */
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$submissionSubjectDao = DAORegistry::getDAO('SubmissionSubjectDAO'); /** @var SubmissionSubjectDAO $submissionSubjectDao */
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$submissionDisciplineDao = DAORegistry::getDAO('SubmissionDisciplineDAO'); /** @var SubmissionDisciplineDAO $submissionDisciplineDao */
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$submissionAgencyDao = DAORegistry::getDAO('SubmissionAgencyDAO'); /** @var SubmissionAgencyDAO $submissionAgencyDao */
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$userGroups = Repo::userGroup()->getCollector()
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->filterByContextIds([$context->getId()])
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->getMany()
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->toArray();
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$editorUserGroupIds = array_map(function ($userGroup) {
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return $userGroup->getId();
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}, array_filter($userGroups, function ($userGroup) {
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return in_array($userGroup->getRoleId(), [Role::ROLE_ID_MANAGER, Role::ROLE_ID_SUB_EDITOR]);
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}));
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// Load the data from the database and store it in an array.
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// (This must be stored before display because we won't know the data
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// dimensions until it has all been loaded.)
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$results = $sectionTitles = [];
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$collector = Repo::submission()->getCollector()->filterByContextIds([$context->getId()]);
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$submissions = $collector->getMany();
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$maxAuthors = $maxEditors = $maxDecisions = 0;
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foreach ($submissions as $submission) {
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$publication = $submission->getCurrentPublication();
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$maxAuthors = max($maxAuthors, count($publication->getData('authors')));
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$editDecisions = Repo::decision()->getCollector()
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->filterBySubmissionIds([$submission->getId()])
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->getMany();
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$statusMap = $submission->getStatusMap();
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// Count the highest number of decisions per editor.
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$editDecisionsPerEditor = [];
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foreach ($editDecisions as $editDecision) {
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$editorId = $editDecision->getData('editorId');
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$editDecisionsPerEditor[$editorId] = ($editDecisionsPerEditor[$editorId] ?? 0) + 1;
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$maxDecisions = max($maxDecisions, $editDecisionsPerEditor[$editorId]);
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}
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// Load editor and decision information
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$stageAssignmentsFactory = $stageAssignmentDao->getBySubmissionAndStageId($submission->getId());
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$editors = $editorsById = [];
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while ($stageAssignment = $stageAssignmentsFactory->next()) {
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$userId = $stageAssignment->getUserId();
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if (!in_array($stageAssignment->getUserGroupId(), $editorUserGroupIds)) {
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continue;
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}
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if (isset($editors[$userId])) {
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continue;
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}
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if (!isset($editorsById[$userId])) {
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$editor = Repo::user()->get($userId, true);
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$editorsById[$userId] = [
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$editor->getLocalizedGivenName(),
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$editor->getLocalizedFamilyName(),
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$editor->getData('orcid'),
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$editor->getEmail(),
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];
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}
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$editors[$userId] = $editorsById[$userId];
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$maxEditors = max($maxEditors, count($editors));
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}
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// Load section title information
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$sectionId = $publication->getData('sectionId');
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if ($sectionId && !isset($sectionTitles[$sectionId])) {
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$section = Repo::section()->get($sectionId);
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$sectionTitles[$sectionId] = $section->getLocalizedTitle();
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}
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$subjects = $submissionSubjectDao->getSubjects($submission->getCurrentPublication()->getId());
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$disciplines = $submissionDisciplineDao->getDisciplines($submission->getCurrentPublication()->getId());
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$keywords = $submissionKeywordDao->getKeywords($submission->getCurrentPublication()->getId());
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$agencies = $submissionAgencyDao->getAgencies($submission->getCurrentPublication()->getId());
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// Store the submission results
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$results[] = [
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'submissionId' => $submission->getId(),
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'title' => htmlspecialchars($publication->getLocalizedFullTitle(null, 'html')),
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'abstract' => html_entity_decode(strip_tags($publication->getLocalizedData('abstract'))),
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'authors' => array_map(function ($author) {
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return [
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$author->getLocalizedGivenName(),
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$author->getLocalizedFamilyName(),
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$author->getData('orcid'),
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$author->getData('country'),
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$author->getLocalizedData('affiliation'),
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$author->getData('email'),
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$author->getData('url'),
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html_entity_decode(strip_tags($author->getLocalizedData('biography'))),
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];
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}, $publication->getData('authors')->values()->toArray()),
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'sectionTitle' => $sectionTitles[$sectionId] ?? '',
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'language' => $publication->getData('locale'),
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'coverage' => $publication->getLocalizedData('coverage'),
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'rights' => $publication->getLocalizedData('rights'),
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'source' => $publication->getLocalizedData('source'),
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'subjects' => join(', ', $subjects[Locale::getLocale()] ?? $subjects[$submission->getLocale()] ?? []),
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'type' => $publication->getLocalizedData('type'),
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'disciplines' => join(', ', $disciplines[Locale::getLocale()] ?? $disciplines[$submission->getLocale()] ?? []),
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'keywords' => join(', ', $keywords[Locale::getLocale()] ?? $keywords[$submission->getLocale()] ?? []),
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'agencies' => join(', ', $agencies[Locale::getLocale()] ?? $agencies[$submission->getLocale()] ?? []),
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'status' => $submission->getStatus() == PKPSubmission::STATUS_QUEUED ? $this->getStageLabel($submission->getStageId()) : __($statusMap[$submission->getStatus()]),
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'url' => $request->url(null, 'workflow', 'access', $submission->getId()),
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'doi' => $submission->getStoredPubId('doi'),
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'dateSubmitted' => $submission->getDateSubmitted(),
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'lastModified' => $submission->getLastModified(),
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'firstPublished' => $submission->getOriginalPublication()?->getData('datePublished') ?? '',
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'editors' => $editors,
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'decisions' => $editDecisions->toArray(),
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];
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}
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// Build and display the column headers.
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$columns = [
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__('article.submissionId'),
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__('article.title'),
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__('article.abstract')
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];
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$authorColumnCount = $editorColumnCount = $decisionColumnCount = 0;
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for ($a = 1; $a <= $maxAuthors; $a++) {
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$columns = array_merge($columns, $authorColumns = [
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__('user.givenName') . ' (' . __('user.role.author') . " {$a})",
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__('user.familyName') . ' (' . __('user.role.author') . " {$a})",
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__('user.orcid') . ' (' . __('user.role.author') . " {$a})",
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__('common.country') . ' (' . __('user.role.author') . " {$a})",
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__('user.affiliation') . ' (' . __('user.role.author') . " {$a})",
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__('user.email') . ' (' . __('user.role.author') . " {$a})",
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__('user.url') . ' (' . __('user.role.author') . " {$a})",
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__('user.biography') . ' (' . __('user.role.author') . " {$a})"
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]);
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$authorColumnCount = count($authorColumns);
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}
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$columns = array_merge($columns, [
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__('section.title'),
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__('common.language'),
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__('article.coverage'),
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__('submission.rights'),
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__('submission.source'),
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__('common.subjects'),
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__('common.type'),
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__('search.discipline'),
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__('common.keywords'),
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__('submission.supportingAgencies'),
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__('common.status'),
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__('common.url'),
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__('metadata.property.displayName.doi'),
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__('common.dateSubmitted'),
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__('submission.lastModified'),
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__('submission.firstPublished'),
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]);
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for ($e = 1; $e <= $maxEditors; $e++) {
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$columns = array_merge($columns, $editorColumns = [
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__('user.givenName') . ' (' . __('user.role.editor') . " {$e})",
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__('user.familyName') . ' (' . __('user.role.editor') . " {$e})",
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__('user.orcid') . ' (' . __('user.role.editor') . " {$e})",
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__('user.email') . ' (' . __('user.role.editor') . " {$e})",
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]);
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$editorColumnCount = count($editorColumns);
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for ($d = 1; $d <= $maxDecisions; $d++) {
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$columns = array_merge($columns, $decisionColumns = [
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__('submission.editorDecision') . " {$d} " . ' (' . __('user.role.editor') . " {$e})",
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__('common.dateDecided') . " {$d} " . ' (' . __('user.role.editor') . " {$e})"
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]);
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$decisionColumnCount = count($decisionColumns);
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}
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}
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fputcsv($fp, array_values($columns));
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// Display the data rows.
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foreach ($results as $result) {
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$row = [];
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foreach ($result as $column => $value) {
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switch ($column) {
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case 'authors':
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for ($i = 0; $i < $maxAuthors; $i++) {
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$row = array_merge($row, $value[$i] ?? array_fill(0, $authorColumnCount, ''));
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}
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break;
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case 'editors':
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$editorIds = array_keys($value);
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$editorEntries = array_values($value);
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for ($i = 0; $i < $maxEditors; $i++) {
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$submissionHasThisEditor = isset($editorEntries[$i]);
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$row = array_merge($row, $submissionHasThisEditor ? $editorEntries[$i] : array_fill(0, $editorColumnCount, ''));
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for ($j = 0; $j < $maxDecisions; $j++) {
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if (!$submissionHasThisEditor) {
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$row = array_merge($row, array_fill(0, $decisionColumnCount, ''));
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continue;
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}
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$editorId = $editorIds[$i];
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$latestDecision = $latestDecisionDate = '';
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$decisionCounter = 0;
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foreach ($result['decisions'] as $decision) {
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if ($decision->getData('editorId') != $editorId) {
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continue;
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}
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if ($j != $decisionCounter++) {
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continue;
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}
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$latestDecision = $this->getDecisionMessage($decision->getData('decision'));
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$latestDecisionDate = $decision->getData('dateDecided');
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}
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$row = array_merge($row, [$latestDecision, $latestDecisionDate]);
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}
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}
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break;
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case 'decisions':
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break; // Handled in the 'editors' case
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default: $row[] = $value; // Other columns can be sent as they are.
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}
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}
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fputcsv($fp, $row);
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}
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fclose($fp);
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}
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/**
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* Get stage label
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*
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* @param int $stageId WORKFLOW_STAGE_ID_...
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*
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* @return string
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*/
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public function getStageLabel($stageId)
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{
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switch ($stageId) {
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case WORKFLOW_STAGE_ID_SUBMISSION:
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return __('submission.submission');
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case WORKFLOW_STAGE_ID_EXTERNAL_REVIEW:
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return __('submission.review');
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case WORKFLOW_STAGE_ID_EDITING:
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return __('submission.copyediting');
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case WORKFLOW_STAGE_ID_PRODUCTION:
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return __('submission.production');
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}
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return '';
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}
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/**
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* Get decision message
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*
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* @param int $decision Decision::*...
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*
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* @return string
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*/
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public function getDecisionMessage($decision)
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{
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switch ($decision) {
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case Decision::ACCEPT:
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return __('editor.submission.decision.accept');
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case Decision::PENDING_REVISIONS:
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return __('editor.submission.decision.requestRevisions');
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case Decision::RESUBMIT:
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return __('editor.submission.decision.resubmit');
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case Decision::DECLINE:
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return __('editor.submission.decision.decline');
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case Decision::SEND_TO_PRODUCTION:
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return __('editor.submission.decision.sendToProduction');
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case Decision::EXTERNAL_REVIEW:
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return __('editor.submission.decision.sendExternalReview');
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case Decision::INITIAL_DECLINE:
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return __('editor.submission.decision.decline');
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case Decision::RECOMMEND_ACCEPT:
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return __('editor.submission.recommendation.display', ['recommendation' => __('editor.submission.decision.accept')]);
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case Decision::RECOMMEND_DECLINE:
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return __('editor.submission.recommendation.display', ['recommendation' => __('editor.submission.decision.decline')]);
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case Decision::RECOMMEND_PENDING_REVISIONS:
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return __('editor.submission.recommendation.display', ['recommendation' => __('editor.submission.decision.requestRevisions')]);
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case Decision::RECOMMEND_RESUBMIT:
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return __('editor.submission.recommendation.display', ['recommendation' => __('editor.submission.decision.resubmit')]);
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default:
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return '';
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}
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}
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}
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Block a user